STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT4Terminal uridylyl transferase 4. (1656 aa)    
Predicted Functional Partners:
LOC100357100
CCHC-type domain-containing protein.
   
 0.901
ENSOCUP00000023367
annotation not available
   
 0.900
DIS3L2
RNB domain-containing protein.
   
 
 0.881
LIN28B
Lin-28 homolog B.
   
 0.844
TENT4B
Terminal nucleotidyltransferase 4B.
   
  
 0.776
TENT4A
Terminal nucleotidyltransferase 4A.
   
  
 0.734
DROSHA
Drosha ribonuclease III.
   
 
 0.711
PAPOLG
Poly(A) polymerase gamma.
   
  
 0.708
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
   
 
 0.702
ERI1
Exoribonuclease 1.
      
 0.693
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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