STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZKSCAN5Zinc finger with KRAB and SCAN domains 5. (837 aa)    
Predicted Functional Partners:
CNOT10
CCR4-NOT transcription complex subunit 10.
   
  
 0.746
FCF1
PINc domain-containing protein.
      
 0.721
DHX16
DEAH-box helicase 16.
    
 
 0.696
L3HYPDH
Trans-L-3-hydroxyproline dehydratase.
      
 0.696
KCTD18
Potassium channel tetramerization domain containing 18.
    
 0.677
AMMECR1L
AMMECR1 like.
      
 0.649
TLK2
Tousled like kinase 2.
   
  
 0.637
USP39
Ubiquitin specific peptidase 39.
    
 
 0.628
SLC4A1AP
Solute carrier family 4 member 1 adaptor protein.
      
 0.604
FAM234A
Family with sequence similarity 234 member A.
      
 0.602
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.