Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM260Transmembrane protein 260. (758 aa)    
Predicted Functional Partners:
RC3H1
Ring finger and CCCH-type domains 1.
      
 0.610
HEATR4
HEAT repeat containing 4.
      
 0.560
ENSOCUP00000033260
DUF1713 domain-containing protein.
      
 0.540
SH2D4A
SH2 domain containing 4A.
      
 0.524
PTPRG
Protein tyrosine phosphatase receptor type G.
      
 0.514
TNFSF18
TNF superfamily member 18.
      
 0.494
CPT2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
      
 0.475
HDAC6
Histone deacetylase 6.
      
 0.473
SORCS3
Sortilin related VPS10 domain containing receptor 3.
      
 0.468
TMTC1
Transmembrane O-mannosyltransferase targeting cadherins 1.
      
 0.465
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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