Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC3LTrafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (181 aa)    
Predicted Functional Partners:
TRAPPC5
Trafficking protein particle complex 5.
   
 0.981
TRAPPC4
Uncharacterized protein.
   
 0.973
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.972
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.972
TRAPPC10
Uncharacterized protein.
    
 0.958
TRAPPC12
Trafficking protein particle complex 12.
    
 0.950
TRAPPC8
Trafficking protein particle complex 8.
    
 0.944
TRAPPC11
Trafficking protein particle complex 11.
    
 0.943
TRAPPC9
Trafficking protein particle complex 9.
   
 0.940
TRAPPC6A
Uncharacterized protein.
   
 0.931
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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