STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSD1Nuclear receptor binding SET domain protein 1. (2700 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
 0.804
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 0.755
EED
Embryonic ectoderm development.
   
 0.707
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.688
G1TVW1_RABIT
Fe2OG dioxygenase domain-containing protein.
    
 0.688
SETD3
Protein-histidine N-methyltransferase.
     
 0.687
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.676
KDM5A
Transporter.
   
 0.667
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.663
PHF23
PHD finger protein 23.
   
 0.657
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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