STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF141Ring finger protein 141. (230 aa)    
Predicted Functional Partners:
RNF183
Ring finger protein 183.
     
 0.695
MALL
Mal, T cell differentiation protein like.
   
  
 0.656
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.639
TCN1
Transcobalamin 1.
      
 0.540
LYPLA1
Acyl-protein thioesterase 1; Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity toward KCNMA1. Has low lysophospholipase activity (By similarity); Belongs to the AB hydrolase superfamily. AB hydrolase 2 family.
      
 0.540
AMD1
Uncharacterized protein.
      
 0.530
HSPE1
Uncharacterized protein; Belongs to the GroES chaperonin family.
      
 0.529
LRRC18
Leucine rich repeat containing 18.
      
 0.495
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
      
 0.463
AKT2
AKT serine/threonine kinase 2.
     
 0.429
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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