Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF141Ring finger protein 141. (230 aa)    
Predicted Functional Partners:
RNF14
RBR-type E3 ubiquitin transferase.
   
 
 0.617
RNF25
Ring finger protein 25.
      
 0.584
RNF150
Ring finger protein 150.
   
 
 0.571
CENPM
Uncharacterized protein.
   
  
 0.532
RNF121
Ring finger protein 121.
      
 0.525
RNF26
Ring finger protein 26.
     
 0.517
STOM
Stomatin.
      
 0.513
RNF34
Ring finger protein 34.
      
 0.495
LRRC18
Leucine rich repeat containing 18.
     
 0.493
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
      
 0.487
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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