STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC5POC5 centriolar protein. (689 aa)    
Predicted Functional Partners:
POC1B
POC1 centriolar protein B.
    
 
 0.953
CETN3
Centrin 3.
   
 
 0.915
CETN1
Centrin 1.
   
 
 0.895
CEP120
Centrosomal protein 120.
   
  
 0.804
CEP135
Centrosomal protein 135.
      
 0.803
SPICE1
Uncharacterized protein.
   
  
 0.772
RTTN
Rotatin.
      
 0.755
CEP164
Centrosomal protein 164.
    
 
 0.732
CEP192
Uncharacterized protein.
      
 0.708
CEP76
Centrosomal protein 76.
      
 0.695
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.