STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE4Copine 4. (576 aa)    
Predicted Functional Partners:
FIGN
Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family.
     
 0.734
PPP1R1C
Protein phosphatase 1 regulatory inhibitor subunit 1C.
   
  
 0.649
VSTM2B
V-set and transmembrane domain containing 2B.
   
  
 0.624
FER1L6
Fer-1 like family member 6.
 
 
  
 0.619
ECRG4
ECRG4 augurin precursor.
      
 0.581
ZNF558
Uncharacterized protein.
      
 0.571
DDN
Dendrin.
   
  
 0.562
FIBCD1
Fibrinogen C domain containing 1.
   
  
 0.557
RNASEH2B
Ribonuclease H2 subunit B.
   
 
 0.549
RXFP1
Relaxin family peptide receptor 1.
   
 
 0.543
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.