STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM8A1Family with sequence similarity 8 member A1. (414 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.928
OS9
OS9 endoplasmic reticulum lectin.
    
 
 0.869
SYVN1
Synoviolin 1.
    
 0.844
HERPUD2
HERPUD family member 2.
    
 
 0.767
TMUB1
Transmembrane and ubiquitin like domain containing 1.
      
 0.742
ERLIN2
ER lipid raft associated 2.
   
  
 0.736
ERLEC1
Endoplasmic reticulum lectin 1.
   
 
 0.733
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
  
 0.728
RNF170
Ring finger protein 170.
   
  
 0.723
AMFR
Autocrine motility factor receptor.
   
 
 0.716
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.