Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC3Coiled-coil domain containing 3. (273 aa)    
Predicted Functional Partners:
CAMK1D
Calcium/calmodulin dependent protein kinase ID.
      
 0.547
PROSER2
Uncharacterized protein.
      
 0.525
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
      
 0.475
NUDT5
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
      
 0.471
ARFGEF3
ARFGEF family member 3.
      
 0.446
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
      
 0.439
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
      
 0.428
ECHDC3
Enoyl-CoA hydratase domain containing 3.
      
 0.426
SEC61A2
SEC61 translocon alpha 2 subunit.
      
 0.425
TMEM50A
Uncharacterized protein.
      
 0.425
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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