STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1396 aa)    
Predicted Functional Partners:
ITGB4
Integrin beta.
   
 0.893
LAMA3
Laminin subunit alpha 3.
   
 0.857
LAMB3
Laminin subunit beta 3.
   
 0.828
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.786
ENSOCUP00000048211
Uncharacterized protein.
   
 0.674
TSPAN11
Tetraspanin.
     
 0.673
SLC24A4
Solute carrier family 24 member 4; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.659
ENAM
Enamelin.
    
 
 0.641
KRT5
Keratin 5; Belongs to the intermediate filament family.
   
 0.624
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.620
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.