STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM13Tripartite motif containing 13. (409 aa)    
Predicted Functional Partners:
TRIM40
Tripartite motif containing 40.
      
 0.611
TRIM23
Tripartite motif containing 23.
    
 0.595
TRIM24
Tripartite motif containing 24.
    
 
 0.567
CALCOCO1
Calcium binding and coiled-coil domain 1.
   
 
 0.546
TRIM11
Tripartite motif containing 11.
      
 0.541
TRIM16
Uncharacterized protein.
    
 
 0.527
TRIM28
Tripartite motif containing 28.
    
 
 0.505
UBQLN4
Ubiquilin 4.
    
 0.489
TEX264
Testis expressed 264, ER-phagy receptor.
   
  
 0.489
TRIM29
Tripartite motif containing 29.
      
 0.482
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.