Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRD2Bromodomain containing 2. (802 aa)    
Predicted Functional Partners:
BRD3
Bromodomain containing 3.
  
 
0.989
G1T4I8_RABIT
Uncharacterized protein.
   
 
 0.972
NSD3
Nuclear receptor binding SET domain protein 3.
   
 0.870
SPOP
Speckle type BTB/POZ protein.
    
 
 0.861
BRD9
Bromodomain containing 9.
    
 
0.841
TBP
TATA-box binding protein.
   
 
 0.837
CRBN
Cereblon.
      
 0.822
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 
 0.808
TAF6
TATA-box binding protein associated factor 6.
    
 
 0.795
BRD7
Bromodomain containing 7.
    
 
0.794
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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