STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN23Protein tyrosine phosphatase non-receptor type 23. (1630 aa)    
Predicted Functional Partners:
STAM2
Signal transducing adaptor molecule 2.
   
 0.920
LOC100344938
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.920
CHMP4C
Charged multivesicular body protein 4C.
   
 0.917
UBAP1
Ubiquitin associated protein 1.
   
 0.910
STAM
Signal transducing adaptor molecule.
   
 0.879
GRAP2
GRB2 related adaptor protein 2.
   
 0.874
ZFYVE16
Zinc finger FYVE domain-containing protein.
   
 
 0.837
CHMP4A
Charged multivesicular body protein 4A.
   
 0.835
MDP1
Uncharacterized protein.
    
 0.833
ZFYVE9
Zinc finger FYVE domain-containing protein.
   
 
 0.819
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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