Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPLX4Complexin 4. (160 aa)    
Predicted Functional Partners:
CPLX2
Complexin 2.
     
 0.966
CPLX3
Complexin 3.
     
0.933
LMAN1
Lectin, mannose binding 1.
 
    
 0.795
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
     
 0.745
STX3
Syntaxin 3; Belongs to the syntaxin family.
     
 0.722
STX3-2
SynN domain-containing protein.
     
 0.718
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.714
ABHD14A
Uncharacterized protein.
      
 0.714
CCDC68
Coiled-coil domain containing 68.
      
 0.693
STARD6
StAR related lipid transfer domain containing 6.
      
 0.690
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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