Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM13PR/SET domain 13. (719 aa)    
Predicted Functional Partners:
TLX3
T cell leukemia homeobox 3.
   
 0.632
TLX1
T cell leukemia homeobox 1.
    
 0.586
DBX2
Homeobox domain-containing protein.
    
 0.586
TFAP2A
Transcription factor AP-2 alpha.
    
 0.534
TPD52L1
TPD52 like 1.
      
 0.505
PRDM11
PR/SET domain 11.
    
 0.499
HOOK3
Hook microtubule tethering protein 3.
    
 0.498
BHLHE22
Basic helix-loop-helix family member e22.
    
 
 0.481
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.466
LHX1
LIM homeobox 1.
    
 0.448
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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