STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM13PR/SET domain 13. (719 aa)    
Predicted Functional Partners:
TLX3
T cell leukemia homeobox 3.
   
 
 0.720
TLX1
T cell leukemia homeobox 1.
    
 
 0.674
HOOK3
Hook microtubule tethering protein 3.
   
 0.582
RCVRN
Recoverin.
   
 0.559
LHX1
LIM homeobox 1.
   
 
 0.558
POU4F1
POU domain protein.
   
  
 0.534
SLC6A5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.526
TFAP2A
Transcription factor AP-2 alpha.
   
 
 0.526
ARHGAP30
Rho GTPase activating protein 30.
   
  
 0.523
BHLHE22
Basic helix-loop-helix family member e22.
    
 
 0.520
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.