EAPP protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAPP

E2F associated phosphoprotein. (261 aa)

Predicted Functional Partners:

AAR2

0.790

PRPF8

0.785

SLC7A6OS

0.777

EFTUD2

0.773

SNRNP200

0.771

TTC27

0.740

NCDN

0.706

CD2BP2

0.644

DDX23

0.631

DHX35

0.599

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAR2	CD2BP2	ENSOCUP00000004760	ENSOCUP00000003575	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	CD2 cytoplasmic tail binding protein 2.	0.869
AAR2	DDX23	ENSOCUP00000004760	ENSOCUP00000026866	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	DEAD-box helicase 23.	0.827
AAR2	EAPP	ENSOCUP00000004760	ENSOCUP00000002801	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	E2F associated phosphoprotein.	0.790
AAR2	EFTUD2	ENSOCUP00000004760	ENSOCUP00000043628	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	Elongation factor Tu GTP binding domain containing 2.	0.981
AAR2	NCDN	ENSOCUP00000004760	ENSOCUP00000011351	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	Neurochondrin.	0.577
AAR2	PRPF8	ENSOCUP00000004760	ENSOCUP00000000075	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	Pre-mRNA processing factor 8.	0.997
AAR2	SLC7A6OS	ENSOCUP00000004760	ENSOCUP00000007366	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	Solute carrier family 7 member 6 opposite strand.	0.459
AAR2	SNRNP200	ENSOCUP00000004760	ENSOCUP00000008503	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	Small nuclear ribonucleoprotein U5 subunit 200.	0.962
CD2BP2	AAR2	ENSOCUP00000003575	ENSOCUP00000004760	CD2 cytoplasmic tail binding protein 2.	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	0.869
CD2BP2	DDX23	ENSOCUP00000003575	ENSOCUP00000026866	CD2 cytoplasmic tail binding protein 2.	DEAD-box helicase 23.	0.989
CD2BP2	EAPP	ENSOCUP00000003575	ENSOCUP00000002801	CD2 cytoplasmic tail binding protein 2.	E2F associated phosphoprotein.	0.644
CD2BP2	EFTUD2	ENSOCUP00000003575	ENSOCUP00000043628	CD2 cytoplasmic tail binding protein 2.	Elongation factor Tu GTP binding domain containing 2.	0.936
CD2BP2	PRPF8	ENSOCUP00000003575	ENSOCUP00000000075	CD2 cytoplasmic tail binding protein 2.	Pre-mRNA processing factor 8.	0.934
CD2BP2	SNRNP200	ENSOCUP00000003575	ENSOCUP00000008503	CD2 cytoplasmic tail binding protein 2.	Small nuclear ribonucleoprotein U5 subunit 200.	0.994
DDX23	AAR2	ENSOCUP00000026866	ENSOCUP00000004760	DEAD-box helicase 23.	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	0.827
DDX23	CD2BP2	ENSOCUP00000026866	ENSOCUP00000003575	DEAD-box helicase 23.	CD2 cytoplasmic tail binding protein 2.	0.989
DDX23	DHX35	ENSOCUP00000026866	ENSOCUP00000031615	DEAD-box helicase 23.	DEAH-box helicase 35.	0.728
DDX23	EAPP	ENSOCUP00000026866	ENSOCUP00000002801	DEAD-box helicase 23.	E2F associated phosphoprotein.	0.631
DDX23	EFTUD2	ENSOCUP00000026866	ENSOCUP00000043628	DEAD-box helicase 23.	Elongation factor Tu GTP binding domain containing 2.	0.999
DDX23	PRPF8	ENSOCUP00000026866	ENSOCUP00000000075	DEAD-box helicase 23.	Pre-mRNA processing factor 8.	0.999