STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH8G-patch domain containing 8. (1501 aa)    
Predicted Functional Partners:
PYM1
PYM homolog 1, exon junction complex associated factor.
      
 0.696
KRR1
KRR1 small subunit processome component homolog.
  
   0.666
DDX10
RNA helicase.
    
 0.630
ADPRHL1
ADP-ribosylhydrolase like 1.
      
 0.601
GPATCH4
G-patch domain containing 4.
   
 
 0.601
SLC22A17
Solute carrier family 22 member 17.
      
 0.597
UTP6
UTP6 small subunit processome component.
    
 
 0.591
RRP36
Ribosomal RNA processing 36.
   
   0.585
NOM1
Nucleolar protein with MIF4G domain 1.
   
   0.578
IMP3
S4 RNA-binding domain-containing protein.
    
 
 0.576
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.