STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOWAHCSosondowah ankyrin repeat domain family member C. (478 aa)    
Predicted Functional Partners:
S100A14
S100 calcium binding protein A14; Belongs to the S-100 family.
    
 
 0.708
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 
 0.608
HSPE1
Uncharacterized protein; Belongs to the GroES chaperonin family.
      
 0.540
FAM189A2
Family with sequence similarity 189 member A2.
     
 0.500
KRT80
Keratin 80; Belongs to the intermediate filament family.
      
 0.493
GPRC5A
G protein-coupled receptor class C group 5 member A.
    
 0.488
LGALS3
Galectin-3; Galactose-specific lectin which binds IgE. May mediate with the alpha-3, beta-1 integrin the stimulation by CSPG4 of endothelial cells migration. Together with DMBT1, required for terminal differentiation of columnar epithelial cells during early embryogenesis. In the nucleus: acts as a pre-mRNA splicing factor. Involved in acute inflammatory responses including neutrophil activation and adhesion, chemoattraction of monocytes macrophages, opsonization of apoptotic neutrophils, and activation of mast cells. Together with TRIM16, coordinates the recognition of membrane damage [...]
      
 0.487
CORIN
Corin, serine peptidase.
   
 0.443
IFT81
Intraflagellar transport 81.
    
 0.441
IFT22
Intraflagellar transport 22.
   
 0.418
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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