STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP28Rho GTPase activating protein 28. (729 aa)    
Predicted Functional Partners:
OR51V1
Olfactory receptor.
   
  
 0.698
ZDHHC6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.569
RSPH14
Radial spoke head 14 homolog.
      
 0.567
C10orf71
Chromosome 10 open reading frame 71.
      
 0.545
RHOB
Ras homolog family member B.
   
 0.539
ARHGAP29
Rho GTPase activating protein 29.
    
 0.529
TXNDC2
Thioredoxin domain-containing protein.
      
 0.526
G1TNP0_RABIT
Uncharacterized protein.
    
 
 0.524
TNS1
Tensin 1.
    
 
 0.524
SCIN
Scinderin.
      
 0.519
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.