STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD4ASterile alpha motif domain containing 4A. (700 aa)    
Predicted Functional Partners:
LNPEP
Leucyl and cystinyl aminopeptidase.
   
 
 0.565
CCDC80
Coiled-coil domain containing 80.
  
 
 
 0.547
GTF2H5
General transcription factor IIH subunit 5.
      
 0.546
UXS1
UDP-glucuronate decarboxylase 1.
      
 0.540
METTL9
Methyltransferase like 9.
      
 0.540
ARL4C
ADP ribosylation factor like GTPase 4C; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.528
HDLBP
High density lipoprotein binding protein.
   
 
 0.520
SSH2
Slingshot protein phosphatase 2.
   
 
 0.517
CAMTA2
Calmodulin binding transcription activator 2.
      
 0.507
MCTP1
Multiple C2 and transmembrane domain containing 1.
      
 0.487
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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