STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6PR/SET domain 6. (667 aa)    
Predicted Functional Partners:
PRDM2
PR/SET domain 2.
   
  
 0.661
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 
 0.660
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.655
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
  0.650
G1TVW1_RABIT
Fe2OG dioxygenase domain-containing protein.
     
  0.650
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
 
 0.640
PRDM14
PR/SET domain 14.
    
 
0.640
KBTBD4
Kelch repeat and BTB domain containing 4.
   
  
 0.613
PRDM8
Uncharacterized protein.
      
 0.575
RTN4RL1
Reticulon 4 receptor like 1.
      
 0.526
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.