STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF1Sperm flagellar 1. (236 aa)    
Predicted Functional Partners:
CFAP70
Cilia and flagella associated protein 70.
   
 0.803
LOC100344427
Uncharacterized protein.
   
 0.802
SPEF2
Sperm flagellar 2.
   
 
 0.753
DTWD1
DTW domain containing 1.
    
 
 0.701
MAPRE1
Microtubule associated protein RP/EB family member 1.
   
 
 0.610
CEP104
Centrosomal protein 104.
      
 0.594
TMEM45B
Transmembrane protein 45B.
      
 0.544
EID1
EP300 interacting inhibitor of differentiation 1.
      
 0.542
TPMT
Thiopurine S-methyltransferase.
      
 0.531
SPPL2A
Signal peptide peptidase like 2A.
      
 0.530
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.