Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC3Tetratricopeptide repeat domain 3. (2032 aa)    
Predicted Functional Partners:
BAG6
BCL2 associated athanogene 6.
   
 0.744
ENSOCUP00000040264
Uncharacterized protein.
   
 0.735
ENSOCUP00000049667
ArsA_ATPase domain-containing protein.
   
 0.735
UBL4B
Ubiquitin-like domain-containing protein.
   
 0.720
G1U637_RABIT
Uncharacterized protein.
   
 0.717
SEC61B
Uncharacterized protein.
   
 0.717
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
  0.659
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
   
 
 0.640
RNF214
Ring finger protein 214.
    
   0.613
GOSR2
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
   0.613
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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