HAUS6 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

HAUS6

HAUS augmin like complex subunit 6. (957 aa)

Predicted Functional Partners:

HAUS3

0.998

HAUS5

0.998

HAUS4

0.996

ENSOCUP00000033703

0.996

G1TKH4_RABIT

0.994

ENSOCUP00000029267

0.992

NEDD1

0.985

HAUS2

0.982

HAUS1

0.982

RBM42

0.890

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOCUP00000029267	ENSOCUP00000033703	ENSOCUP00000029267	ENSOCUP00000033703	Uncharacterized protein.	Uncharacterized protein.	0.987
ENSOCUP00000029267	G1TKH4_RABIT	ENSOCUP00000029267	ENSOCUP00000017460	Uncharacterized protein.	Uncharacterized protein.	0.988
ENSOCUP00000029267	HAUS1	ENSOCUP00000029267	ENSOCUP00000015018	Uncharacterized protein.	HAUS augmin like complex subunit 1.	0.928
ENSOCUP00000029267	HAUS3	ENSOCUP00000029267	ENSOCUP00000024357	Uncharacterized protein.	HAUS augmin like complex subunit 3.	0.988
ENSOCUP00000029267	HAUS4	ENSOCUP00000029267	ENSOCUP00000011267	Uncharacterized protein.	Uncharacterized protein.	0.984
ENSOCUP00000029267	HAUS5	ENSOCUP00000029267	ENSOCUP00000034070	Uncharacterized protein.	HAUS augmin like complex subunit 5.	0.983
ENSOCUP00000029267	HAUS6	ENSOCUP00000029267	ENSOCUP00000003046	Uncharacterized protein.	HAUS augmin like complex subunit 6.	0.992
ENSOCUP00000029267	NEDD1	ENSOCUP00000029267	ENSOCUP00000009419	Uncharacterized protein.	NEDD1 gamma-tubulin ring complex targeting factor.	0.551
ENSOCUP00000029267	RBM42	ENSOCUP00000029267	ENSOCUP00000045475	Uncharacterized protein.	RNA binding motif protein 42.	0.806
ENSOCUP00000033703	ENSOCUP00000029267	ENSOCUP00000033703	ENSOCUP00000029267	Uncharacterized protein.	Uncharacterized protein.	0.987
ENSOCUP00000033703	G1TKH4_RABIT	ENSOCUP00000033703	ENSOCUP00000017460	Uncharacterized protein.	Uncharacterized protein.	0.993
ENSOCUP00000033703	HAUS1	ENSOCUP00000033703	ENSOCUP00000015018	Uncharacterized protein.	HAUS augmin like complex subunit 1.	0.969
ENSOCUP00000033703	HAUS2	ENSOCUP00000033703	ENSOCUP00000009464	Uncharacterized protein.	HAUS augmin like complex subunit 2.	0.868
ENSOCUP00000033703	HAUS3	ENSOCUP00000033703	ENSOCUP00000024357	Uncharacterized protein.	HAUS augmin like complex subunit 3.	0.995
ENSOCUP00000033703	HAUS4	ENSOCUP00000033703	ENSOCUP00000011267	Uncharacterized protein.	Uncharacterized protein.	0.996
ENSOCUP00000033703	HAUS5	ENSOCUP00000033703	ENSOCUP00000034070	Uncharacterized protein.	HAUS augmin like complex subunit 5.	0.988
ENSOCUP00000033703	HAUS6	ENSOCUP00000033703	ENSOCUP00000003046	Uncharacterized protein.	HAUS augmin like complex subunit 6.	0.996
ENSOCUP00000033703	NEDD1	ENSOCUP00000033703	ENSOCUP00000009419	Uncharacterized protein.	NEDD1 gamma-tubulin ring complex targeting factor.	0.697
ENSOCUP00000033703	RBM42	ENSOCUP00000033703	ENSOCUP00000045475	Uncharacterized protein.	RNA binding motif protein 42.	0.855
G1TKH4_RABIT	ENSOCUP00000029267	ENSOCUP00000017460	ENSOCUP00000029267	Uncharacterized protein.	Uncharacterized protein.	0.988