STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4GALNT2Beta-1,4 N-acetylgalactosaminyltransferase. (523 aa)    
Predicted Functional Partners:
LOC100350827
Rieske domain-containing protein.
      
 0.792
GLT1D1
Glycos_transf_1 domain-containing protein.
      
 0.595
GALNT17
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.541
TM9SF3
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.541
GXYLT2
Glucoside xylosyltransferase 2.
   
  
 0.541
ST6GALNAC6
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.540
GLT8D2
Glycosyltransferase 8 domain containing 2.
      
 0.525
UMOD
Uromodulin.
     
 0.520
LOC100348940
Uncharacterized protein.
      
 0.495
B4GALT2
Beta-1,4-galactosyltransferase 2.
      
 0.491
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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