STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSCAN18Zinc finger and SCAN domain containing 18. (524 aa)    
Predicted Functional Partners:
HAND1
Heart- and neural crest derivatives-expressed protein 1; Transcription factor that plays an essential role in both trophoblast giant cell differentiation and in cardiac morphogenesis (By similarity). Binds the DNA sequence 5'-NRTCTG-3' (non-canonical E-box) (By similarity). Acts as a transcriptional repressor of SOX15 (By similarity). In the adult, could be required for ongoing expression of cardiac-specific genes (By similarity).
   
 
 0.663
PGBD1
PiggyBac transposable element derived 1.
    
  
0.625
BHLHE22
Basic helix-loop-helix family member e22.
    
 
 0.615
ZSCAN20
Zinc finger and SCAN domain containing 20.
    
  
0.556
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.551
KLF10
Kruppel like factor 10.
    
 
 0.485
ZNF274
Zinc finger protein 274.
   
  
0.474
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
      
 0.465
ZSCAN29
Uncharacterized protein.
   
  
0.439
PGBD2
PiggyBac transposable element derived 2.
    
   0.434
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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