STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDE1Glycerophosphodiester phosphodiesterase 1. (331 aa)    
Predicted Functional Partners:
NAPEPLD
N-acyl phosphatidylethanolamine phospholipase D.
      
 0.877
ABHD4
Abhydrolase domain containing 4.
   
  
 0.798
FAAH
Fatty acid amide hydrolase.
  
  
 0.699
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.637
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
      
 0.627
SNX29
Sorting nexin 29.
      
 0.583
ZNF248
Zinc finger protein 248.
      
 0.582
GDPD3
Glycerophosphodiester phosphodiesterase domain containing 3.
      
 0.554
FAM171B
Family with sequence similarity 171 member B.
   
  
 0.541
L2HGDH
L-2-hydroxyglutarate dehydrogenase.
    
 0.538
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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