G1SK22_RABIT protein (Oryctolagus cuniculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSOCUP00000044498	G1SK22_RABIT	ENSOCUP00000044498	ENSOCUP00000003131	Ribosomal_L40e domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999
ENSOCUP00000044498	LOC100353606	ENSOCUP00000044498	ENSOCUP00000020536	Ribosomal_L40e domain-containing protein.	Uncharacterized protein.	0.985
ENSOCUP00000044498	RPL23	ENSOCUP00000044498	ENSOCUP00000011964	Ribosomal_L40e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.998
ENSOCUP00000044498	RPL37	ENSOCUP00000044498	ENSOCUP00000028035	Ribosomal_L40e domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.997
ENSOCUP00000044498	RPS15	ENSOCUP00000044498	ENSOCUP00000022933	Ribosomal_L40e domain-containing protein.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
ENSOCUP00000044498	RPS16	ENSOCUP00000044498	ENSOCUP00000001855	Ribosomal_L40e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.997
ENSOCUP00000044498	RPS28	ENSOCUP00000044498	ENSOCUP00000016683	Ribosomal_L40e domain-containing protein.	Ribosomal protein S28.	0.999
ENSOCUP00000044498	RPS3	ENSOCUP00000044498	ENSOCUP00000018598	Ribosomal_L40e domain-containing protein.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.997
ENSOCUP00000044498	RPS4X	ENSOCUP00000044498	ENSOCUP00000028880	Ribosomal_L40e domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.870
ENSOCUP00000044498	RPS5	ENSOCUP00000044498	ENSOCUP00000026493	Ribosomal_L40e domain-containing protein.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
G1SK22_RABIT	ENSOCUP00000044498	ENSOCUP00000003131	ENSOCUP00000044498	Ubiquitin-like domain-containing protein.	Ribosomal_L40e domain-containing protein.	0.999
G1SK22_RABIT	LOC100353606	ENSOCUP00000003131	ENSOCUP00000020536	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.997
G1SK22_RABIT	RPL23	ENSOCUP00000003131	ENSOCUP00000011964	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.996
G1SK22_RABIT	RPL37	ENSOCUP00000003131	ENSOCUP00000028035	Ubiquitin-like domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.996
G1SK22_RABIT	RPS15	ENSOCUP00000003131	ENSOCUP00000022933	Ubiquitin-like domain-containing protein.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.998
G1SK22_RABIT	RPS16	ENSOCUP00000003131	ENSOCUP00000001855	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.997
G1SK22_RABIT	RPS28	ENSOCUP00000003131	ENSOCUP00000016683	Ubiquitin-like domain-containing protein.	Ribosomal protein S28.	0.998
G1SK22_RABIT	RPS3	ENSOCUP00000003131	ENSOCUP00000018598	Ubiquitin-like domain-containing protein.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.996
G1SK22_RABIT	RPS4X	ENSOCUP00000003131	ENSOCUP00000028880	Ubiquitin-like domain-containing protein.	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.	0.996
G1SK22_RABIT	RPS5	ENSOCUP00000003131	ENSOCUP00000026493	Ubiquitin-like domain-containing protein.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.998