Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLF3Kruppel like factor 3. (436 aa)    
Predicted Functional Partners:
CTBP2
C-terminal binding protein 2.
    
 0.901
FHL3
Four and a half LIM domains 3.
    
 
 0.811
KLF11
Kruppel like factor 11.
   
  
 0.675
LHX8
LIM homeobox 8.
    
 0.591
TSPAN8
Tetraspanin.
      
 0.573
MTMR3
Myotubularin related protein 3.
      
 0.549
TMEM156
Transmembrane protein 156.
      
 0.525
KLHL5
Kelch like family member 5.
    
 0.514
TMEM184B
Transmembrane protein 184B.
    
 0.480
EP300
E1A binding protein p300.
    
 0.461
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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