STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHTF1Putative homeodomain transcription factor 1. (722 aa)    
Predicted Functional Partners:
ENSOCUP00000027227
MRG domain-containing protein.
    
 0.816
LDB3
LIM domain binding 3.
    
 
 0.777
MSL2
MSL complex subunit 2.
    
 0.773
RSBN1
Round spermatid basic protein 1.
 
    
 0.748
SWT1
SWT1 RNA endoribonuclease homolog.
   
 
 0.738
TRIML2
Tripartite motif family like 2.
    
 0.682
TONSL
Uncharacterized protein.
   
 0.654
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
 
 
 
 0.618
ELP5
Elongator acetyltransferase complex subunit 5.
    
 0.618
FEM1C
Fem-1 homolog C.
   
 0.615
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.