STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
    
 0.738
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.710
RSPRY1
Ring finger and SPRY domain containing 1.
    
 
 0.699
TPRA1
Transmembrane protein adipocyte associated 1.
   
  
 0.683
NUDT13
Nudix hydrolase 13.
      
 0.674
FBXO9
F-box protein 9.
   
 
 0.667
IP6K2
Inositol hexakisphosphate kinase 2; Converts inositol hexakisphosphate (InsP6) to diphosphoinositol pentakisphosphate (InsP7/PP-InsP5).
      
 0.663
ZDHHC2
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.631
MPPED1
Metallophosphoesterase domain containing 1.
      
 0.611
SLC17A5
Sialin (Predicted).
    
 
 0.597
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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