MAPRE2 protein (Oryctolagus cuniculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MAPRE2

Microtubule associated protein RP/EB family member 2. (325 aa)

Predicted Functional Partners:

MAPRE3

0.922

MAPRE1

0.917

CKAP5

0.865

PAFAH1B1

0.824

MAD2L1

0.816

CRTAC1

0.775

TRAIP

0.773

BUB3

0.765

CENPE

0.757

KIF18A

0.752

Your Current Organism:

Oryctolagus cuniculus

NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BUB3	CENPE	ENSOCUP00000014989	ENSOCUP00000030473	BUB3 mitotic checkpoint protein.	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.937
BUB3	CKAP5	ENSOCUP00000014989	ENSOCUP00000013952	BUB3 mitotic checkpoint protein.	Cytoskeleton associated protein 5.	0.784
BUB3	KIF18A	ENSOCUP00000014989	ENSOCUP00000018681	BUB3 mitotic checkpoint protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.762
BUB3	MAD2L1	ENSOCUP00000014989	ENSOCUP00000007123	BUB3 mitotic checkpoint protein.	Mitotic arrest deficient 2 like 1.	0.999
BUB3	MAPRE1	ENSOCUP00000014989	ENSOCUP00000025968	BUB3 mitotic checkpoint protein.	Microtubule associated protein RP/EB family member 1.	0.821
BUB3	MAPRE2	ENSOCUP00000014989	ENSOCUP00000003277	BUB3 mitotic checkpoint protein.	Microtubule associated protein RP/EB family member 2.	0.765
BUB3	MAPRE3	ENSOCUP00000014989	ENSOCUP00000012772	BUB3 mitotic checkpoint protein.	Microtubule associated protein RP/EB family member 3.	0.765
BUB3	PAFAH1B1	ENSOCUP00000014989	ENSOCUP00000012982	BUB3 mitotic checkpoint protein.	Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...]	0.717
CENPE	BUB3	ENSOCUP00000030473	ENSOCUP00000014989	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BUB3 mitotic checkpoint protein.	0.937
CENPE	CKAP5	ENSOCUP00000030473	ENSOCUP00000013952	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Cytoskeleton associated protein 5.	0.944
CENPE	KIF18A	ENSOCUP00000030473	ENSOCUP00000018681	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.983
CENPE	MAD2L1	ENSOCUP00000030473	ENSOCUP00000007123	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Mitotic arrest deficient 2 like 1.	0.967
CENPE	MAPRE1	ENSOCUP00000030473	ENSOCUP00000025968	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Microtubule associated protein RP/EB family member 1.	0.767
CENPE	MAPRE2	ENSOCUP00000030473	ENSOCUP00000003277	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Microtubule associated protein RP/EB family member 2.	0.757
CENPE	MAPRE3	ENSOCUP00000030473	ENSOCUP00000012772	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Microtubule associated protein RP/EB family member 3.	0.757
CENPE	PAFAH1B1	ENSOCUP00000030473	ENSOCUP00000012982	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...]	0.940
CKAP5	BUB3	ENSOCUP00000013952	ENSOCUP00000014989	Cytoskeleton associated protein 5.	BUB3 mitotic checkpoint protein.	0.784
CKAP5	CENPE	ENSOCUP00000013952	ENSOCUP00000030473	Cytoskeleton associated protein 5.	Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.944
CKAP5	KIF18A	ENSOCUP00000013952	ENSOCUP00000018681	Cytoskeleton associated protein 5.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.960
CKAP5	MAD2L1	ENSOCUP00000013952	ENSOCUP00000007123	Cytoskeleton associated protein 5.	Mitotic arrest deficient 2 like 1.	0.912