Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOGARAM2Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
LRRC39
Leucine rich repeat containing 39.
      
 0.540
KRCC1
Lysine rich coiled-coil 1.
      
 0.525
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.486
LYSMD2
LysM domain-containing protein.
      
 0.484
RASSF2
Ras association domain family member 2.
      
 0.483
UNC119
Unc-119 lipid binding chaperone.
      
 0.481
ZNF526
Zinc finger protein 526.
      
 0.476
ZNF574
Zinc finger protein 574.
      
 0.476
SMPDL3A
Acid sphingomyelinase-like phosphodiesterase.
      
 0.471
LRRC2
Leucine rich repeat containing 2.
      
 0.463
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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