Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCAREPhotoreceptor cilium actin regulator. (1291 aa)    
Predicted Functional Partners:
ABI1
Abl interactor 1.
      
 0.811
NHSL1
NHS like 1.
      
 0.700
SERPINE3
Serpin family E member 3; Belongs to the serpin family.
      
 0.673
WASF3
WASP family member 3.
      
 0.668
LPP
LIM domain containing preferred translocation partner in lipoma.
      
 0.657
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
   
  
 0.644
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
   
  
 0.556
GUCA1B
Guanylate cyclase activator 1B.
   
  
 0.531
ABCA4
ATP binding cassette subfamily A member 4.
      
 0.516
ROM1
Retinal outer segment membrane protein 1.
   
  
 0.516
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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