STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL24A1Collagen type XXIV alpha 1 chain. (1694 aa)    
Predicted Functional Partners:
COL5A1
Fibrillar collagen NC1 domain-containing protein.
     
 0.658
COL6A2
Uncharacterized protein.
   
 0.629
COL16A1
Collagen type XVI alpha 1 chain.
  
 
0.582
COL22A1
VWFA domain-containing protein.
  
0.558
COL21A1
Collagen type XXI alpha 1 chain.
  
  
0.558
COL17A1
Collagen type XVII alpha 1 chain.
  
  
0.549
C1QL1
Complement C1q like 1.
     
 0.542
COL18A1
Endostatin domain-containing protein.
 
  
 0.542
COL4A6
Collagen type IV alpha 6 chain.
  
  
0.522
PCOLCE
Procollagen C-endopeptidase enhancer.
   
 0.513
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.