Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL24A1Collagen type XXIV alpha 1 chain. (1694 aa)    
Predicted Functional Partners:
COL5A1
Fibrillar collagen NC1 domain-containing protein.
   
 
 0.688
COL18A1
Endostatin domain-containing protein.
    
 0.628
COL21A1
Collagen type XXI alpha 1 chain.
  
  
0.619
COL6A2
Uncharacterized protein.
   
 0.596
COL8A2
Collagen type VIII alpha 2 chain.
  
  
0.584
COL16A1
Collagen type XVI alpha 1 chain.
  
  
0.578
COL22A1
VWFA domain-containing protein.
  
 
0.576
ADAMTS14
ADAM metallopeptidase with thrombospondin type 1 motif 14.
   
 0.561
NID2
Nidogen 2.
    
 
 0.555
KCNH4
Potassium voltage-gated channel subfamily H member 4.
      
 0.551
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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