Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1orf146Chromosome 1 open reading frame 146. (181 aa)    
Predicted Functional Partners:
ZNF507
Zinc finger protein 507.
   
 
 0.762
C15orf41
Chromosome 15 open reading frame 41.
  
 0.577
SPTBN5
Spectrin beta, non-erythrocytic 5.
   
  
 0.522
ECI2
ACB domain-containing protein.
   
 0.511
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.477
HFM1
Helicase for meiosis 1.
      
 0.468
CWC15
CWC15 spliceosome associated protein homolog.
      
 0.463
MSH4
MutS homolog 4.
      
 0.460
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.457
SPTB
Spectrin beta chain; Belongs to the spectrin family.
   
  
 0.452
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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