STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARDBPTAR DNA binding protein. (330 aa)    
Predicted Functional Partners:
FUS
FUS RNA binding protein.
   
 0.975
UBE2I
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.970
GSC
Goosecoid homeobox.
    
   0.947
C9orf72
C9orf72-SMCR8 complex subunit.
      
 0.942
SOD1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.874
UBQLN2
Ubiquilin 2.
   
 0.857
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 
 0.852
KCTD2
Uncharacterized protein.
   
  0.849
CHMP2B
Charged multivesicular body protein 2B.
      
 0.840
SNCA
Alpha-synuclein; Belongs to the synuclein family.
    
 
 0.820
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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