STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX6Iroquois homeobox 6. (375 aa)    
Predicted Functional Partners:
TM4SF18
Transmembrane 4 L six family member 18.
      
 0.546
RTL4
Retrotransposon Gag like 4.
      
 0.505
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.496
SRF
Serum response factor.
   
 
 0.495
DGKK
Diacylglycerol kinase.
   
  
 0.488
BNC2
Basonuclin 2.
      
 0.466
CC2D2A
Coiled-coil and C2 domain containing 2A.
      
 0.455
IRX1
Iroquois homeobox 1.
   
 
0.442
PBX2
PBX homeobox 2.
   
0.441
PRUNE2
Prune homolog 2 with BCH domain.
      
 0.439
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.