STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A11Solute carrier family 4 member 11. (882 aa)    
Predicted Functional Partners:
COL8A2
Collagen type VIII alpha 2 chain.
      
 0.899
LOXHD1
Uncharacterized protein.
      
 0.856
AGBL1
ATP/GTP binding protein like 1.
   
  
 0.846
CYYR1
Cysteine and tyrosine rich 1.
      
 0.844
KANK4
KN motif and ankyrin repeat domains 4.
    
 0.681
B3GLCT
Beta 3-glucosyltransferase.
      
 0.664
TMEM178A
Transmembrane protein 178A.
   
  
 0.622
AOPEP
Aminopeptidase O (putative).
      
 0.591
SLC9A1
Sodium/hydrogen exchanger 1; Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
    
 
 0.561
KERA
Keratocan.
     
 0.559
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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