STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MITD1Microtubule interacting and trafficking domain containing 1. (249 aa)    
Predicted Functional Partners:
CHMP1B
Charged multivesicular body protein 1B.
    
 
 0.861
CHMP1A
Charged multivesicular body protein 1A.
    
 
 0.768
SMAGP
Small cell adhesion glycoprotein.
      
 0.696
IST1
IST1 factor associated with ESCRT-III.
      
 0.666
TSNAXIP1
Translin associated factor X interacting protein 1.
   
  
 0.653
NYAP1
Neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1.
      
 0.650
PRR14
Proline rich 14.
      
 0.649
CHMP5
Charged multivesicular body protein 5.
   
 
 0.649
PGLYRP2
Peptidoglycan recognition protein 2.
      
 0.618
AKAP17A
RRM domain-containing protein.
      
 0.616
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.