STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM117Transmembrane protein 117. (467 aa)    
Predicted Functional Partners:
PIP5KL1
Phosphatidylinositol-4-phosphate 5-kinase like 1.
      
 0.707
NELL2
Neural EGFL like 2.
      
 0.705
PCNX1
Pecanex 1.
      
 0.700
SCAF11
SR-related CTD associated factor 11.
      
 0.627
ANO6
Anoctamin.
      
 0.587
USP53
Ubiquitin specific peptidase 53.
      
 0.558
UNC79
Uncharacterized protein.
      
 0.545
DIDO1
Uncharacterized protein.
      
 0.524
DBX2
Homeobox domain-containing protein.
      
 0.500
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
      
 0.495
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.