STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRT3Proline rich transmembrane protein 3. (1025 aa)    
Predicted Functional Partners:
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
   
  
 0.711
LOC100343047
Ubiquitin-like domain-containing protein.
    
 0.708
ENSOCUP00000038446
Ubiquitin-like domain-containing protein.
    
 0.708
ENSOCUP00000044498
Ribosomal_L40e domain-containing protein.
    
 0.708
ADGRL1
Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.
      
 0.695
G1SK22_RABIT
Ubiquitin-like domain-containing protein.
    
 0.692
G1TZL0_RABIT
Ubiquitin-like domain-containing protein.
    
 0.692
ENSOCUP00000047714
Ubiquitin-like domain-containing protein.
    
 0.692
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.689
TBC1D10C
TBC1 domain family member 10C.
   
  
 0.681
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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