Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOOK1Hook microtubule tethering protein 1. (728 aa)    
Predicted Functional Partners:
AKTIP
AKT interacting protein.
   
 0.910
FAM160A1
Family with sequence similarity 160 member A1.
    
 
 0.828
BICD2
BICD cargo adaptor 2.
   
 
 0.824
FAM160B1
Family with sequence similarity 160 member B1.
    
 
 0.792
FAM160A2
Family with sequence similarity 160 member A2.
    
 0.789
TSGA10
Testis specific 10.
    
 0.778
BICDL1
BICD family like cargo adaptor 1.
    
 0.763
PMFBP1
Polyamine modulated factor 1 binding protein 1.
      
 0.743
DCTN1
CAP-Gly domain-containing protein.
    
 
 0.723
SUN5
Sad1 and UNC84 domain containing 5.
   
 
 0.721
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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