Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAB39BRAB39B, member RAS oncogene family (Predicted). (213 aa)    
Predicted Functional Partners:
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.978
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.959
WDR41
WD_REPEATS_REGION domain-containing protein.
     
 0.949
SQSTM1
Sequestosome 1.
    
 0.893
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.759
RAB3IP
RAB3A interacting protein.
    
 0.743
FAAP24
FA core complex associated protein 24.
    
   0.738
RAB8B
RAB8B, member RAS oncogene family.
   
 
  0.737
ENSOCUP00000047551
Uncharacterized protein.
   
 
  0.737
ENSOCUP00000035029
Uncharacterized protein.
     
 0.681
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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