STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTPALAlpha tocopherol transfer protein like. (337 aa)    
Predicted Functional Partners:
GRAMD4
GRAM domain containing 4.
   
  
 0.662
TRUB2
Uncharacterized protein.
      
 0.545
QPCT
Glutaminyl-peptide cyclotransferase.
      
 0.522
ABHD6
Abhydrolase domain containing 6.
   
  
 0.519
GPX7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
  
 0.495
TIPIN
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.485
FNDC5
Fibronectin type III domain containing 5.
      
 0.429
ZNF398
Zinc finger protein 398.
    
 
 0.424
ZNF783
Uncharacterized protein.
    
 
 0.424
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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