STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1PKHD1 ciliary IPT domain containing fibrocystin/polyductin. (3985 aa)    
Predicted Functional Partners:
PKD1
Uncharacterized protein.
      
 0.933
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.927
UMOD
Uromodulin.
    
 0.661
INVS
Inversin.
     
 0.650
NEK8
NIMA related kinase 8.
      
 0.644
SSTR3
Somatostatin receptor 3.
     
 0.644
IFT88
Intraflagellar transport 88.
     
 0.636
ARF4
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.629
ARF4-2
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.625
NPHP3
TPR_REGION domain-containing protein.
     
 0.608
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.