STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC47Coiled-coil domain containing 47. (483 aa)    
Predicted Functional Partners:
WDR83OS
Uncharacterized protein.
    
 
 0.915
TMCO1
Transmembrane and coiled-coil domains 1.
   
 
 0.885
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.866
ENSOCUP00000048888
Uncharacterized protein.
    
 
 0.808
SEC61G
SEC61 translocon gamma subunit.
    
   0.761
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.746
RPL13A
Uncharacterized protein.
   
   0.741
RPL4
Ribos_L4_asso_C domain-containing protein.
   
   0.726
ANKZF1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
  
 0.725
RPL22
Uncharacterized protein.
    
   0.723
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
Server load: low (32%) [HD]