Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZFYVE28FYVE-type domain-containing protein. (390 aa)    
Predicted Functional Partners:
ENSOCUP00000043082
Uncharacterized protein.
    
   0.743
ENSOCUP00000039970
Raptor_N domain-containing protein.
    
   0.619
CCDC181
Coiled-coil domain containing 181.
      
 0.608
MTOR
Serine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family.
    
   0.569
MLST8
MTOR associated protein, LST8 homolog.
    
   0.569
A1CF
APOBEC1 complementation factor.
      
 0.562
RBM46
RNA binding motif protein 46.
      
 0.560
SLC7A4
Solute carrier family 7 member 4.
   
  
 0.536
SLC5A9
Solute carrier family 5 member 9; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.530
TSKU
Tsukushi, small leucine rich proteoglycan.
      
 0.525
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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