Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUFY2RUN and FYVE domain containing 2. (674 aa)    
Predicted Functional Partners:
RUFY1
RUN and FYVE domain containing 1.
    
  0.987
RUFY4
RUN and FYVE domain containing 4.
    
 0.883
RAB4A
RAB4A, member RAS oncogene family.
    
 0.863
RUFY3
RUN and FYVE domain containing 3.
   
   0.779
RAB33A
RAB33A, member RAS oncogene family.
    
 
 0.746
MBIP
MAP3K12 binding inhibitory protein 1.
      
 0.701
ARL8A
ADP ribosylation factor like GTPase 8A.
    
 0.629
ARL8B
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.629
CLIP1
CAP-Gly domain containing linker protein 1.
      
 0.596
ERC1
ELKS/RAB6-interacting/CAST family member 1.
   
  
 0.595
Your Current Organism:
Oryctolagus cuniculus
NCBI taxonomy Id: 9986
Other names: European rabbit, Japanese white rabbit, Lepus cuniculus, New Zealand rabbit, O. cuniculus, domestic rabbit, rabbit, rabbits
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